Study of statistical properties of GB-speckles; part II: laser speckles generated on the nucleotide sequences of the fumC gene of Chlamydia trachomatis strains isolated in the Republic of Belarus

Valentina Feodorova; Anna Kolosova; Liudmila Rubanik; Nikolay Poleschuk; Alexander Ulyanov; Sergey Zaytsev; Onega Ulianova; Yury Saltykov; Sergey Ulyanov

doi:10.1117/12.2563653

9 April 2020 Study of statistical properties of GB-speckles; part II: laser speckles generated on the nucleotide sequences of the fumC gene of Chlamydia trachomatis strains isolated in the Republic of Belarus

Valentina Feodorova, Anna Kolosova, Liudmila Rubanik, Nikolay Poleschuk, Alexander Ulyanov, Sergey Zaytsev, Onega Ulianova, Yury Saltykov, Sergey Ulyanov

Author Affiliations +

Proceedings Volume 11457, Saratov Fall Meeting 2019: Optical and Nano-Technologies for Biology and Medicine; 114571Y (2020) https://doi.org/10.1117/12.2563653
Event: Saratov Fall Meeting 2019: VII International Symposium on Optics and Biophotonics, 2019, Saratov, Russian Federation

Abstract

As it has been demonstrated earlier, different types of re-coding of nucleotide sequences to gene-based speckle-patterns (GB-speckles) can be used. In this paper an advanced study, devoted to optimization of this algorithm, is presented. With this purpose, investigations of statistical properties of the GB-speckles, generated on the nucleotide sequences of the fumC gene of Chlamydia trachomatis, have been performed. The first- and the second-order statistics of intensity fluctuations in GB-speckles have been analyzed. Perspectives of the gene identification using a statistical analysis of laser GB-speckles have been demonstrated. The analyzed nucleotide sequences of the fumC gene of C. trachomatis strains have been isolated in the Republic of Belarus.

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Valentina Feodorova, Anna Kolosova, Liudmila Rubanik, Nikolay Poleschuk, Alexander Ulyanov, Sergey Zaytsev, Onega Ulianova, Yury Saltykov, and Sergey Ulyanov "Study of statistical properties of GB-speckles; part II: laser speckles generated on the nucleotide sequences of the fumC gene of Chlamydia trachomatis strains isolated in the Republic of Belarus", Proc. SPIE 11457, Saratov Fall Meeting 2019: Optical and Nano-Technologies for Biology and Medicine, 114571Y (9 April 2020); https://doi.org/10.1117/12.2563653

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