Comparison of structural and statistical characteristics of interfering GB speckles, generated for the nucleotide sequences of the gene GPCR of lumpy skin disease virus and sheep-pox virus

Yuriy Saltykov; Onega Ulianova; Sergey Ulyanov; Sergey Zaytsev; Alexander Ulyanov; Valentina Feodorova

doi:10.1117/12.2588543

4 May 2021 Comparison of structural and statistical characteristics of interfering GB speckles, generated for the nucleotide sequences of the gene GPCR of lumpy skin disease virus and sheep-pox virus

Yuriy Saltykov, Onega Ulianova, Sergey Ulyanov, Sergey Zaytsev, Alexander Ulyanov, Valentina Feodorova

Author Affiliations +

Proceedings Volume 11845, Saratov Fall Meeting 2020: Optical and Nanotechnologies for Biology and Medicine; 118450D (2021) https://doi.org/10.1117/12.2588543
Event: Saratov Fall Meeting 2020, 2020, Saratov, Russian Federation

Abstract

GB-speckles (gene-based speckles) have been generated for two nucleotide sequences of the gene GPCR of Lumpy Skin Disease Virus and Sheeppox Virus. Statistical properties of the interfering GB-speckles have been studied. It have been demonstrated that a structure of the interference speckle patterns is very sensitive to the presence of very small differences between the comparing nucleotide sequences. Case of a formation of evident interferential fringes in resulting picture (superposition of two GB-speckle patterns) has been analyzed in details. It has been demonstrated that an application of the GB-speckles, generated on the target virus nucleotide sequences has the great perspectives from viewpoint of modern bioinformatics.

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Yuriy Saltykov, Onega Ulianova, Sergey Ulyanov, Sergey Zaytsev, Alexander Ulyanov, and Valentina Feodorova "Comparison of structural and statistical characteristics of interfering GB speckles, generated for the nucleotide sequences of the gene GPCR of lumpy skin disease virus and sheep-pox virus", Proc. SPIE 11845, Saratov Fall Meeting 2020: Optical and Nanotechnologies for Biology and Medicine, 118450D (4 May 2021); https://doi.org/10.1117/12.2588543

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