Prof. Sarah E. Bohndiek
Professor of Biomedical Physics at Univ of Cambridge
SPIE Involvement:
Conference Program Committee | Author | Instructor | Student Chapter Advisor | Special Event Speaker
Publications (76)

SPIE Journal Paper | 29 March 2024 Open Access
JBO, Vol. 29, Issue 03, 036005, (March 2024) https://doi.org/10.1117/12.10.1117/1.JBO.29.3.036005
KEYWORDS: Tunable filters, Tissues, Colon, Optical filters, Design, Endoscopy, Cancer detection, Image classification, Scattering, Image filtering

Proceedings Article | 13 March 2024 Presentation
Proceedings Volume PC12842, PC1284205 (2024) https://doi.org/10.1117/12.3002540
KEYWORDS: Photoacoustic imaging, Skin, Photoacoustic spectroscopy, Oxygenation, Arteries, Tissue optics, Reproducibility, Optical sensing, Medical image reconstruction, Image restoration

Proceedings Article | 13 March 2024 Presentation
Proceedings Volume PC12827, PC128270M (2024) https://doi.org/10.1117/12.3002477
KEYWORDS: Multispectral imaging, Capillaries, Cameras, Vascular diseases, Oxygenation, Light sources, Imaging systems, Image segmentation, Control systems, Visualization

Proceedings Article | 13 March 2024 Presentation
Isabelle Racicot, Catherine-Louise White, Graham Spicer, Callum Williams, Massimiliano di Pietro, Sarah Bohndiek
Proceedings Volume PC12831, PC128310C (2024) https://doi.org/10.1117/12.3001596
KEYWORDS: Endoscopy, Hyperspectral imaging, Endoscopes, Cancer detection, Cancer, Diseases and disorders, Digital micromirror devices, Tunable lasers, Tissues, Target detection

Proceedings Article | 13 March 2024 Presentation
Calum Williams, Isabelle Racicot, Sarah Bohndiek
Proceedings Volume PC12900, PC1290001 (2024) https://doi.org/10.1117/12.3001587
KEYWORDS: Digital micromirror devices, Hyperspectral imaging, Optical scanning systems, Light sources and illumination, Cameras, Raster graphics, Light sources, Endoscopy, Data acquisition, Control systems

Showing 5 of 76 publications
Conference Committee Involvement (4)
Photons Plus Ultrasound: Imaging and Sensing 2024
28 January 2024 | San Francisco, California, United States
Photons Plus Ultrasound: Imaging and Sensing 2023
29 January 2023 | San Francisco, California, United States
Photons Plus Ultrasound: Imaging and Sensing 2022
23 January 2022 | San Francisco, California, United States
Photons Plus Ultrasound: Imaging and Sensing 2021
6 March 2021 | Online Only, California, United States
Course Instructor
SC1238:
A biomarker is a “defined characteristic that is measured as an indicator of normal biological processes, pathogenic processes, or responses to an exposure or intervention”. New sensing technologies seek to measure biomarkers, usually with the goal of improving patient management, however, there remains a widespread misunderstanding over how biomarkers can be used in the context of biomedical imaging. This course covers the basics of imaging biomarkers from the perspective of biomedical optics. The course will underscore the importance of accurately defining and validating imaging biomarkers, drawing on examples from standard radiological imaging modalities as well as emerging optical modalities. Using several interactive activities, attendees will see examples of: how imaging biomarkers are currently used in clinical practice; the pitfalls often encountered when introducing new biomarkers; and where novel optical imaging biomarkers have the potential to impact future patient care.
SC1291: Biomedical Image Analysis: An Introduction
Our community generates a vast amount of biomedical imaging data, ranging from super-resolution microscopy images on the nanometre scale, to diffuse optical tomography images on the millimetre scale. These data are increasingly complex, requiring quantitative analysis to extract imaging biomarkers, rather than simply visual interpretation. This course explains basic principles and applications of analysis techniques for biomedical imaging data, using several hands-on practical examples based on Fiji (ImageJ). <p> </p> We will begin by examining the general principles of evaluating image quality and information content, by introducing important concepts such as contrast and modulation transfer. We will then consider how to process images containing noise or artifacts, for example, with the application of simple filters. Finally, we will discuss how best to identify appropriate regions of interest and measure a range of parameters from these that allow us to perform quantitative image analysis, considering precision and accuracy of our data. Anyone who wants to better understand their imaging data and develop skills in applying image processing software will benefit from taking this course.
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