Dr. Murat Yildirim Profile

Dr. Murat Yildirim

Postdoctoral Associate at Massachusetts Institute of Technology

SPIE Involvement:

Author

Area of Expertise:

nonlinear imaging , ultrafast laser ablation , photonic crystal fibers

Websites:

Company Website

Publications (9)

SPIE Journal Paper | 25 August 2022 Open Access

In vivo hamster cheek pouch subepithelial ablation, biomaterial injection, and localization: pilot study

Ilan Gabay, Kaushik Subramanian, Liam Andrus, Andrew DuPlissis, Murat Yildirim, Adela Ben-Yakar

JBO, Vol. 27, Issue 08, 080501, (August 2022) https://doi.org/10.1117/12.10.1117/1.JBO.27.8.080501

KEYWORDS: Tissues, Laser ablation, In vivo imaging, Rhodamine, Collagen, Surgery, Microscopes, Optical fibers, Animal model studies, Particles

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Proceedings Article | 7 March 2022 Presentation

DEEP learning powered De-scattering with Excitation Patterning (DEEP) for high-throughput wide-field multiphoton microscopy

Dushan Wadduwage, Cheng Zheng, Jong Park, Peter T. So, Murat Yildirim, Navodini Wijethilake, Udith Haputhanthri

Proceedings Volume PC11965, PC119650B (2022) https://doi.org/10.1117/12.2615331

KEYWORDS: Optical lithography, Multiphoton microscopy, Light scattering, Mathematical modeling, Data modeling, Luminescence, Image quality, Tissues, Scattering, Inverse problems

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Proceedings Article | 24 April 2017 Open Access

Third harmonic generation imaging of intact human cerebral organoids to assess key components of early neurogenesis in Rett Syndrome (Conference Presentation)

Murat Yildirim, Danielle Feldman, Tianyu Wang, Dimitre Ouzounov, Stephanie Chou, Justin Swaney, Kwanghun Chung, Chris Xu, Peter T. So, Mriganka Sur

Proceedings Volume 10069, 100690A (2017) https://doi.org/10.1117/12.2256182

KEYWORDS: Brain, Optical lithography, Stem cells, Neurogenesis, Harmonic generation, Microscopy, Proteins, 3D modeling, Pulsed laser operation, Computer programming

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Proceedings Article | 5 April 2016 Presentation + Paper

Increasing the penetration depth for ultrafast laser tissue ablation using glycerol based optical clearing

Ilan Gabay, Kaushik Subramanian, Chris Martin, Murat Yildirim, Valery Tuchin, Adela Ben-Yakar

Proceedings Volume 9707, 97070X (2016) https://doi.org/10.1117/12.2213482

KEYWORDS: Tissues, Scattering, Laser ablation, Tissue optics, Laser scattering, Optical clearing, Natural surfaces, Ultrafast lasers, Laser tissue interaction, Microsurgery

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SPIE Journal Paper | 17 September 2015 Open Access

Tripling the maximum imaging depth with third-harmonic generation microscopy

Murat Yildirim, Nicholas Durr, Adela Ben-Yakar

JBO, Vol. 20, Issue 09, 096013, (September 2015) https://doi.org/10.1117/12.10.1117/1.JBO.20.9.096013

KEYWORDS: Tissues, Microscopy, Laser tissue interaction, Natural surfaces, Absorption, Scattering, Third-harmonic generation, Monte Carlo methods, Tissue optics, Temperature metrology

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SPIE Journal Paper | 5 November 2013 Open Access

Parameters affecting ultrafast laser microsurgery of subepithelial voids for scar treatment in vocal folds

Murat Yildirim, Onur Ferhanoglu, James Kobler, Steven Zeitels, Adela Ben-Yakar

JBO, Vol. 18, Issue 11, 118001, (November 2013) https://doi.org/10.1117/12.10.1117/1.JBO.18.11.118001

KEYWORDS: Tissues, Laser ablation, Collagen, Second-harmonic generation, Ultrafast lasers, Microsurgery, Optical fibers, Electrons, Laser tissue interaction, Scattering

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Proceedings Article | 26 September 2013 Paper

Measurement of spin-flip scattering and photon echo response in GaMnAs

Kimberley Hall, Murat Yildirim, Sam March, Reuble Mathew, Angela Gamouras, Xinyu Liu, Margaret Dobrowolska, Jacek Furdyna, Daniel Webber

Proceedings Volume 8813, 88132V (2013) https://doi.org/10.1117/12.2018902

KEYWORDS: Four wave mixing, Manganese, Excitons, Scattering, Absorption, Gallium arsenide, Spectroscopy, Magnetic semiconductors, Doping, Ferromagnetics

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Proceedings Article | 22 February 2013 Paper

Maximum imaging depth comparison in porcine vocal folds using 776-nm vs. 1552-nm excitation wavelengths

Murat Yildirim, Onur Ferhanoglu, James Kobler, Steven Zeitels, Adela Ben-Yakar

Proceedings Volume 8588, 858825 (2013) https://doi.org/10.1117/12.2005630

KEYWORDS: Second-harmonic generation, Tissues, Harmonic generation, Signal to noise ratio, Ultrafast lasers, Fiber lasers, Microscopes, Luminescence, Point spread functions, Image enhancement

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SPIE Journal Paper | 16 March 2012 Open Access

Towards endoscopic ultrafast laser microsurgery of vocal folds

Christopher Hoy, W. Neil Everett, Murat Yildirim, Adela Ben-Yakar, James Kobler, Steven Zeitels

JBO, Vol. 17, Issue 03, 038002, (March 2012) https://doi.org/10.1117/12.10.1117/1.JBO.17.3.038002

KEYWORDS: Laser ablation, Tissues, Microsurgery, Femtosecond phenomena, Collagen, Laser tissue interaction, Luminescence, Ultrafast lasers, Imaging systems, Optical fibers

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Showing 5 of 9 publications

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